Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMDFYIKQIIIHQFSPNDTELVLSDTPLTLTPRIDDYFRKKLSKVFSDEAKRGYFGEDNVFMSHLQDDLYVSSCQIAQLWKEEFVISEDQKTNDLVFIQFDKDGMEHFAFLRISLKEQFAHVSENQEQPITITQNNLPSAAQTPDEALVVNKSSKQYYLIEKRIKHNGSFANYFSENLLQVQPEQSVKKSIKMVEQTAQKIAENFNKDDFSFQSKMKSAIYKNLEEEQELSPEKLADQLFDDNLTARLTFVDELKDAIPGPVQVSDIDHSRQIKKLENQKLSLSNGIELIVPNNVYQDAESVEFIQNPDGTYSILIKNIQDIQNK |
| 1Y4U Chain:A ((414-489)) | ----------------------------------------------------------------------------------------------------------------VSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLEL-LRKKGIEVLLLSDRI--DEWMMNYLTE--FDGKPFQSVSKVDES------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15260 for 450 contacts (33.9/contact) +
2D Compatibility (PS) -7866 + (NN) -1182 + (LL) 17528
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: 16240.0 ( 36.09 by residue)
QMean score : 0.187
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