Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCAFFKTDTLKSCAIDQNAGSKKSATLQIARRVKKGIGD-----FP-------KTEKGNSLIVGYPQIGLSPFLFSHVSGHVLRLPENKSTELWEDCQILNKGHCVEMRK
1AG9 Chain:A ((8-56))
-------------------GSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFC
General information:
TITO was launched using:
RESULT:
Template:
1AG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2423 for 159 contacts (15.2/contact) +
2D Compatibility (PS) -4283 + (NN) -4170 + (LL) 1488
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -7492.0 ( -47.12 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_1AG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AG9-query.scw
PDB file :
Tito_Scwrl_1AG9.pdb
: