Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDTFKVKWFKRGMSLLVLILVFFLGLGFGQMGNSSQSKDRPKQTATKKTRTNTITQTQVKEFLVAYYTK----KDL------EENRNRYKDYMTEGLYNATISEENKAQNQAYRGFVVNFEFQDA---NIYIDQVHKQVICEVTYTNDLLQKKNNKDGAQIGVVNHTTIQLAYTKLNGKYLINQMSTILLTDSANPSEETESYGAIAPSNTKD |
| 3KZT Chain:A ((20-142)) | ----------------------------------------------------SSRIEQEAIGMIEDFYEAYAASFMSTGKEALALGDSIKQKFLTKELIEKVDRLIE---ATDADPIIRAQDLGENDMKTLSVKHLNDN-WYEVNYTSAKG----S------QYERAVSIPVRVVNVDGQYLIDDITPE------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KZT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41998 for 690 contacts (-60.9/contact) +
2D Compatibility (PS) -11736 + (NN) -1697 + (LL) 5356
1D Compatibility (HY) -5200 + (ID) 600
Total energy: -55875.0 ( -80.98 by residue)
QMean score : 0.277
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