Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINQGQEYQYFKDKISHLEREVSRLSSYEYEHRLLKDVIADCLLQGQLTVSELPQAIRLIQGDDLFYTYAWRFVEATGD----CQAGITILKILQDDLNYFFAIGKLSQKQYSQWLEKWLSFLERGRIA-----------FKG-EKDFERYFQDQTEANRSLFSDFNL
3KEV Chain:A ((99-185))
----------------------------------------------------------------AFYQFVFQYSKEPSQRSLPAETAMALWDVLLRG-------------RF-SLLDSWLEFLKNNTHSISRDTWNLLYDFSQL-KDLSDY--D---AWPVLIDDFVK
General information:
TITO was launched using:
RESULT:
Template:
3KEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23429 for 325 contacts (-72.1/contact) +
2D Compatibility (PS) -6771 + (NN) -3082 + (LL) 6800
1D Compatibility (HY) -7600 + (ID) 850
Total energy: -34932.0 ( -107.48 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3KEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KEV-query.scw
PDB file :
Tito_Scwrl_3KEV.pdb
: