Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLFLSLERKFKAASDKEVSKQQEAYLRHHFKCYGIKSPERRMLYKELIKAAKRQAKIDW-QLLDKCWQSDYREYHHFVLDYLLAMSQFLTYNDCSRLEFYARHQQWWDSIDVLTKIFGN-LSLKDDKVMNLLSEWSLDQDFWMRRLAIEHQLGFKEKTNTDILSLFILRNTGSQEFFINKAIGWALRDYSKYNKVWVKDFISNHYDELSTLSIREGSKYL
2B6C Chain:A ((12-215))
---------------NPETAAKMSAYMKHQFVFAGIPAPERQALSKQLLKESHTWPKEKLCQEIEAYYQKTEREYQYVAIDLALQNVQRFSLEEVVAFKAYVPQKAWWDSVDAWRKFFGSWVALHLTELPTIFALFYGAENFWNRRVALNLQLMLKEKTNQDLLKKAIIYDRTTEEFFIQKAIGWSLRQYSKTNPQWVEELMKELV--LSPLAQREGSKYL
General information:
TITO was launched using:
RESULT:
Template:
2B6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90300 for 1550 contacts (-58.3/contact) +
2D Compatibility (PS) -21156 + (NN) -7778 + (LL) 1516
1D Compatibility (HY) -15600 + (ID) 3750
Total energy: -137068.0 ( -88.43 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_2B6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B6C-query.scw
PDB file :
Tito_Scwrl_2B6C.pdb
: