Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKGLKSLYTLLGLISLTLLGFVAVISKQHIYLPSFNWLDWDFNLPSPIDVGMYHYFFWGALVLFVIVLLAILVVLFYPRRYTEYKLADKTGKLMLKKSAIEGFVKTEVLKTGLMKSL-SVTAHLYKKKVKVDVKGLLTSRTNVPEQLEHIQSDVELGLKEFFGLEKKMNTRVFVKQVEEENVGNAKTNKSRVE |
3J1Z Chain:P ((216-293)) | ----------------------------------------------------------------------------------------------------TRQRIKLIAKEDPRVLGLHDLRTRQAGKTVFIQFHLELDGNLSLNEAH-SITDTTGLRVKAAFED---AEVIIHQDPVQVEPTTQ--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J1Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24212 for 524 contacts (-46.2/contact) +
2D Compatibility (PS) -7901 + (NN) 925 + (LL) 9132
1D Compatibility (HY) 0 + (ID) 600
Total energy: -22656.0 ( -43.24 by residue)
QMean score : 0.446
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