Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFNLEQVKVFENYEIENWEEGQVTLTTKVVDSSLNYYGNAHGGYLFTLCDQVSGLVAISTGYEAVTLQSNINYLRAGRLDDLLTVIGTCVHNGRTTKVVDVHIKNQKGEMVTTAIFTMFVTGERKEK
4ZRB Chain:G ((7-130))
--FHFDAISAFENYEIEKMRDGHVVVTTKVVNSSLNYYGNAHGGYLFTLCDQISGLVVISLGLDGVTLQSSINYLKAGKLDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVCKATFTMFVTGQRS--
General information:
TITO was launched using:
RESULT:
Template:
4ZRB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73102 for 939 contacts (-77.9/contact) +
2D Compatibility (PS) -13383 + (NN) -2663 + (LL) 440
1D Compatibility (HY) -16000 + (ID) 4150
Total energy: -108858.0 ( -115.93 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_4ZRB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZRB-query.scw
PDB file :
Tito_Scwrl_4ZRB.pdb
: