Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIAIIGAGAVGATLAYYLSKEKDIQVTVFDYGV--GQATKAAAGIISPWFSKRRNKAWYRMARLGADFYSKLVTDLQK-DGFETKFYQQTGVFLLKKDESQLESLFALADKRRLKSPLIGDLQILNKSEANTHFPELD-GYEQLLYASGGARVEGADLTRILLEAS---GVNVIKDEVHFTIT--DNGFRV--Q--GIDFDKLVLASGAWLAKILDEHNYQVDIRPQKGQLRDYYFSNINTGKYPVVMPEGELDIIPFDNGKVSVGASHENDMAFDLNIDFKVLDKFEEQAIGYFPQLKKADTTSERVGIRAYTSDFSPFFGPVPCMEGAYAASGLGSTGLTVGPLIGYELCQLILNKEN-QLNLEDYDITKYVKKISR |
| 1RYI Chain:A ((17-377)) | HYEAVVIGGGIIGSAIAYYLAKEN-KNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIR-QHNGGMFKLAFSEEDVLQLRQMDD---L-----DSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIP--LTKTL-YHDHCYIVPRKSGRLVVGATMKPGD-WSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMNKEVNQDWLHAFRIDRK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219237 for 3051 contacts (-71.9/contact) +
2D Compatibility (PS) -36757 + (NN) -7751 + (LL) 1424
1D Compatibility (HY) -14000 + (ID) 3850
Total energy: -280171.0 ( -91.83 by residue)
QMean score : 0.463
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