Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKARELIDVYETYCPQELSMEGDISGLQIGSLDKEIKTVMVALDVRETTVAEAIERQVDLLIVKHAPIFRPLKDLV-ATPQNKIYIDLLKSDIAVYVSHTNIDIVPNGLNDWFCELLDIQYPDILSET------------------------------------------------------------------------------------------------SNGYGIGRIGDVRPQ-SFEFFAWKIKDVFGLDSVRLVSYDKSNPEIQRVAICGGSGQSFYKEAIAKGADVFVTGDIYYHTAQEMITNGLLAIDPGHHIEVLFVS-KIATMIEQWKLEKGWDISVLESKAPTNPFYHM |
2GX8 Chain:A ((29-397)) | PNGHEIISLFESMYPKHLAMEGDKIGLQIGALNKPVRHVLIALDVTEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDIAIYAAHTNVDVAKGGVNDLLAEALGLQNTEVLAPTYAEEMKKVVVFVPVTHAEEVRKALGDAGAGHIGNYSHCTFSSEGTGTFVPQQLERVEEVRIETIIPASLQRKVIKAMVTAHPYEEVAYDVYPLDNKGETLGLGKIGYLQEEMTLGQFAEHVKQSLDVKGARVV--GKLDDKVRKVAVLGGDGNKYINQAKFKGADVYVTGDMYYHVAHDAMMLGLNIVDPGHN-VEKVMKQGVQKQLQEKVDAKKLNVHIHASQLHTDPFIFV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211328 for 2152 contacts (-98.2/contact) +
2D Compatibility (PS) -27874 + (NN) -16015 + (LL) 268
1D Compatibility (HY) -21600 + (ID) 4600
Total energy: -281149.0 ( -130.65 by residue)
QMean score : 0.472
|
|
|