Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQTVEEVRYQLEEWLAQGFTSPEDRANYQALKEQYEDETLDVSFSKREIISQLEVMITTRENDFPGLDEVMKEGYLDLVAQLQELDSKESEHYRQLLG
4LK1 Chain:C ((995-1070))
------------DRWLELGLTDEEKQNQLEQLAEQYDE--LKHEFEKK--LEAKRRKITQGDDLAPGVLKIVKV-YLAVKRRIQPGDKMAGRHGNKGVI
General information:
TITO was launched using:
RESULT:
Template:
4LK1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10672 for 264 contacts (40.4/contact) +
2D Compatibility (PS) -7945 + (NN) -1064 + (LL) 1724
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -1713.0 ( -6.49 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_4LK1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LK1-query.scw
PDB file :
Tito_Scwrl_4LK1.pdb
: