Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIYLGKNTKRNQRLLTFLDSYEIAYTCKE--SGDINREVLQSLFSKTSDCFD-LLSPSFLRFKRQN----QMTLSELMNLVLRNPDQNIRLPLVIDKDKVYPDMGVEEARVFIPRRLKVTFFRDSLFCDKEQR
3GFK Chain:A ((1-118))
MVTLYTSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTRSKVFQKLNVNVESMPLQDLYRLINEHPGL-LRRPIIIDEKRLQVGYNEDEIRRFLPRKV----------------
General information:
TITO was launched using:
RESULT:
Template:
3GFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72793 for 724 contacts (-100.5/contact) +
2D Compatibility (PS) -11965 + (NN) -6353 + (LL) 1164
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -97247.0 ( -134.32 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3GFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GFK-query.scw
PDB file :
Tito_Scwrl_3GFK.pdb
: