Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIAIVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD
3BRO Chain:A ((6-140))
-RDLGRLLKIASNQMSTRFDIFAKKYD---LTGTQMTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLETIILSYMDSDQSQMTSGLNKEEVVFLEKILKRMIES-------
General information:
TITO was launched using:
RESULT:
Template:
3BRO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42973 for 853 contacts (-50.4/contact) +
2D Compatibility (PS) -14819 + (NN) -8924 + (LL) 1192
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -72174.0 ( -84.61 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_3BRO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BRO-query.scw
PDB file :
Tito_Scwrl_3BRO.pdb
: