Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKIILKSSVLGLVAGTSIMFSSAFADQVGVQVIGVNDFHGALDNTGTANMPDGKVTNAGTAAQLDAYIDDAQKDFKQTNPNGESIRVQAGDMVGASPANSGLLQDEPTVKTFNAMNVEYGTLGNHEFDEGLAEYNRIVTGKAPAPDSNINNITKSYPHEAAKQEIVVANVIDKVNKQIPYNWKPYAIKNIPVNNKSVNVGFIGIVTKDIPNLVLRKNYEQYEFLDEAETIVKYAKELQAKNVKAIVVLAHVPATSKDDIAEGEAAEMMKKVNQLFPENSVDIVFAGHNHQYTNG-------------------LVGKTRIVQALSQGKAYADVRGVLDTDTQDFIETPSAKVVAVAPGKKTGSADIQAIVDQANTIVKQVTEAKIGTAEVSGMITRSVDQDNVSPVGSLITEAQLAIARKSWPDIDFAMTNNGGIRADLLIKPDGTITWGAAQAVQPFGNILQVVEITGRDLYKALNEQYDQ---KQNFFLQIAGLRYTYTDNKEGGEETPFKVVKAYKS---NGEEINPDAKYKLVINDFLFGGGDGFASFRNAKLL--GAINPDTEVFMAYITDLEKAGKKVSVPNNKPKIYVTMKMVNETITQNDGTHSIIKKLYLDRQGNIVAQEIVSDTLNQTKSKSTKINPVTTIHKKQLHQFTAINPMRNYGKPSNSTTVKSKQLPKTNSEYGQSFLMSVFGVGLIGIALNTKKKHMK |
| 2Z1A Chain:A ((28-534)) | -----------------------------FTLTLVHTNDTHAHLEPVELTLS--GEKTPVGGVARRVALFDRVWAR------AKNPLFLDAGDVFQGTLY-FNQYRGLADRYFMHRLRYRAMALGNHEFDLGPGPLADFLK--------------------GARFKVVSANVDASREPRLKGLFAPYAVVVVG----GERVGIIGLTTPDTREISNPG--PTVAFLDPYESAQKAVYELLAKGVNKIVVLSHLGYGEDL--------KLARRL------VGVQVIVGGHSHTLLGSFPHKELSPAGPYPTVVKNPEGKDVLVVQAWEWGKVVGLLEVTFDAKGE-LL-AYKGEALLMTPEAAPEDFFAKEALLAYAQPVMALMQQVIAEAKVDLVGERAVVRRRESNLGNLITDGMLWKTRN--AGTQIALQNGGGIRASI---PKGPITVGKVYEVLPFGNTLVVMDLKGKEILAALENGVSQWENTAGRFLQVSGLRYAFDLSRPA----GSRVVRVEVKTEKGYVPLDLEATYRVVVNNFIANGGDGFTVLKEAQGYRVDTGFSDAESFMDYLKEL----KVVEAGLEGRIEVLNEP--------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166364 for 4372 contacts (-38.1/contact) +
2D Compatibility (PS) -51878 + (NN) -16454 + (LL) 11292
1D Compatibility (HY) -27600 + (ID) 6250
Total energy: -257254.0 ( -58.84 by residue)
QMean score : 0.471
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