Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKATFTRNQSGYLYSAEISGHAGSGEYGFDVICAAVSTLSINFINSLEALTTCQAQLIINDVEGGYMKIDLSSIPQHKEDKVQLLFESYLLGMTNLSKDSSEFVSTIVMTH
2G0J Chain:A ((1-111))
MIQATFIRRK-GILESVELTGHAGSGEYGFDIVCAAVSTLSMNLVNALEVLADCTVSLQMDEFDGGYMKIDLSYITNKSDEKVQLLFEAFLLGITNLAENSPEFVTAKIMTQ
General information:
TITO was launched using:
RESULT:
Template:
2G0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77081 for 821 contacts (-93.9/contact) +
2D Compatibility (PS) -11703 + (NN) -4660 + (LL) -28
1D Compatibility (HY) -14800 + (ID) 3250
Total energy: -111522.0 ( -135.84 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_2G0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G0J-query.scw
PDB file :
Tito_Scwrl_2G0J.pdb
: