Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIKDFASRAINTRLGFILLLVVIYWLKTIWAYHTDFYLGLENSYQLFLTIINPIPLGLLIIGLALYVKRTKAFYITAFITYAIVNILLIANAIYYREFSDFITVSAVLASSKTSAGLGDSALNLLRIWDLVYVFDFIILIFLFATKKIHLDDRPFNKRASFSITALSGLLFSINLFLAEIDRPELLSRGFSNTYIVKALGLPSFSIYSGNQTYQAQKERNGATAQELATAKKYVAEHYAKPNPEYYGIGKGRNVIMIHLESFQQFLIDYKLNVDGKEHVVTPFINSLYHSKETISFSNFFHQVKAGKTSDAETLMENSLFGLSSGSFMVNYGGENTQFAAPHILAQNGGYSSAVFHGNVGTFWNRNNAYKQWGYDYFFDSSYFSKQTKDNSFQYGLNDKYMFADSIKYLEHMQQPFYTKFITVSNHYPYTSLKGESDEEGFPLAKTNDETINGYFATANYLDTALKSFFEYLKAAGVYDNSIIVMYGDHYGISNTRNPSLAELLGKDPETWSEYDNAMLQRVPYMIHIPGYSKGFISNTYGGEVDNLPTLLHILGIDTSKYTQLGQDLLSKDNKQMVAMRTTGQYITPKYTNYSGHLYYTDSGQEITNPDETTKAEIKAIRDATNKQLSTSDSIQTGDLLRFDENNGLKTVEVEKFNYTHSLKALKAKERKLKDRSTSIYSKHNNKSTVDLFHAPSYLELQDPNKTHKTSKK |
| 4UOR Chain:E ((42-448)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YTKSKYAAPNPEYFGKAKGKNVIYIHLESFQQFLVNYKLN--GEE--VTPFINSFFKDQNTLSFTNFFHQTGQGKTADSEMLLENSLYGLPQGSAFTT-KGQNTYESASAILGQQG-YTSAVFHGNYKSFWNRDEIYKQFGYDNFFDASYYDMNEADVS-NYGLKDKPFFKESEEYLSSLQQPFYTKFITLTNHFPYPI--DEKDASIAP-ATTGDSSVDTYFQTARYLDESVKSFVDYLKKSGLYDNSVIIMYGDHYGISDNHEEAMTKILGKD---YNTFENAQAQRVPLMIHVPGV-QGGVQEQYGGQVDLLPTLLHLLGVDNKEYLQFGTDLLSKDHKQLVPFR-NGDYITPTYSMIGGNMYNQQTGEPIA----TETKEMKETKEKVAKELELSDSVLQGDLLRFYAPDGFKKVDPSKYNYNK---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143352 for 3574 contacts (-40.1/contact) +
2D Compatibility (PS) -44286 + (NN) -16881 + (LL) 23776
1D Compatibility (HY) -42400 + (ID) 11100
Total energy: -234243.0 ( -65.54 by residue)
QMean score : 0.535
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