Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITIDKILEILKNDHNFREILFHEHYYYNWTQNVTFNALSYDSRQISSDTLFFAK-GATFKKEYLDSAITAGLSFYVSEIDYGADIPVILVNDIKKAMSLISMSFYNNPQNKLKLLAFTGTKGKTTAAYFAYHML-KVNHRPAMLSTMNTTLDGKSFFKSHLTTPESLDLFRMMATAVENQMTHLVMEVSSQAYLTKRVYGLTFDVGVFLNISPDHIGPIEHPTFEDYFFHK----RLLMENSNAVVVNSQMDHFNIVKEQVEYIPHDFYGDYSEN---VITESQAFSFHVKGKLENTYDIKLIGKFNQENAIAAGLACLRLGVSIEDIKNGIAQ-TTVPGRMEVLTQTN--GAKIFVDYAHNGDSLKKLLAVVEEHQKGDIILVLGAPGNKGQSRRKDFGDVINQHPNLQVILTADDPNFEDPLVISQEIASHIN--RPVTIIIDREEAIANASTLTNCKLDAIIIAGKGADAYQIIKGNRDNYSGDLEVAKKYLKR |
4BUB Chain:A ((22-480)) | --------------------------------DLEITGVSNHSSKVKKGDLFICRR------EIIPEVMEKGAVAVVVEREIDLDFPYIQVFDSRYFEAKVASLFFEDPWKDVLTFGVTGTNGKTTTTMMIYHMLTSLGERGSVLTTAVKRILGNSYY-DDITTPDAITILSAMKENREGGGKFFALEVSSHALVQQRVEGVRFDVGIFTNISRDHLDF--HGTFENYLKAKLHLFDLLKDDGVAVLNESLADAFNRKSRKITFGTSK-NADYRLGNIEVSWEGTQFVLETPDGLLKVF-TRAIGDFNAYNAAAAIAALHQLGYDPKDLASSLETFTGVEGRFEVVRGAKKIGLNVVVDFAHSPDALEKLLKNVRKISQGRVIVVFGAGGNSDRGKRPMMSEVASKLADV-VILTTDDPRGEDPEQIMEDLIKGIDKRKPYLVLFDRREAIETALTIAN-RGDSVVIAGRGHERYQIIDEEKKVPFQDREVVEEIIRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233881 for 3721 contacts (-62.9/contact) +
2D Compatibility (PS) -47703 + (NN) -16041 + (LL) 3844
1D Compatibility (HY) -30000 + (ID) 7250
Total energy: -331031.0 ( -88.96 by residue)
QMean score : 0.477
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