Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTD--SKASYKAIVKKFEKENKGVTVKMIESN-DSKAQENVKKDP--SKAADVFSLPH-DQLGQLVESGVIQEIPEQYSKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADDVKSYETITSKGKFGQ-QLKAANSYVTGPLFLSVGDTLFGKSGE--DAKGTNWGNEAGVSVLKWIADQKKNDGFVN--LTAENTMSKFGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAAYLTNAESQKIQFEKRHIVPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIKSSDYLKRLKQFDKDIAKTK |
| 1URS Chain:A ((30-393)) | -------------------------------------QTITVWSWQTGPELQDVKQIAAQWAKAHGD-KVIVVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPVPSGVLN--TGLYAPNTIDAIKVNGTMYSVPVSVQVAAIYYNKKLVPQ-PPQTWAEFVKDANAHGFMYDQANLYFDYAIIGGYGGYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDMVSKYHWMTPSTNGSIAKAEFLAGKIGMYVSGPWDTADIEKA-K-IDFGVTPWPTLPN-GKH--ATPFLGVITAFVNKESK-----TQAADWSLVQALTSAQAQQMYFRDSQQIPALLSVQRSSAVQSSPTFKAFVEQL---RYAVPMPNIPQMQAVWQAM-SILQNIIAGKVSPEQGAKDFVQNIQKG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1URS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35441 for 3080 contacts (-11.5/contact) +
2D Compatibility (PS) -37543 + (NN) -13400 + (LL) 3900
1D Compatibility (HY) -20400 + (ID) 4000
Total energy: -106884.0 ( -34.70 by residue)
QMean score : 0.396
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