Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYTNGNFEAFARPRKPEGVDKKSAYIVGSGLAGLAAAVFLIRDGQMDGQRIHIFEELPLSGGSLDGVKRPDIGFVTRGGREMENHFECMWDMYRSIPSLEVPDASYLDEFYWLDKDDPNSSNCRLIHKQGNRLESDGDFTLGTHSKELVKLVMETEESLGAKTIEEVFSKEFFESNFWTYWATMFAFEKWHSAIEMRRYAMRFIHHIGGLPDFTSLKFNKYNQYDSMVKPIISYLESHNVDVQFDSKVTNISVDFKNGQKLAKAIHLTVGGEAKTIDLTPDDFVFVTNGSITESTNYGSHDTVAKPNTDLGGSWNLWENLAAQSDEFGHPKVFYKDIPKESWFVSATATIKDPAIEPYIERLTHRDLHDGKVNTGGIVTVTDSNWMMSFAIHRQPHFKEQKENETIVWIYGLYSNVEGNYIKKPIEECTGREITEEWLYHLGVPEMKIHDLSDKQYVSTVPVYMPYITSYFMPRVKGDRPDVIPQGSVNLAFIGNFAESPSRDTVFTTEYSIRTAMEAVYTFLNIERGVPEVFNSAFDIRVLLQSLYYLNDKKSVEDMDLPIP-ALMRKVGMKKIRGTYLEELLREAHLL |
4IA5 Chain:A ((3-591)) | --YSNGNYEAFADPKKPAGVDKKSAYIIGSGLAGLSTAVFLVRDAQMKGENIHILEELPV--------------FVVRGGREMENHFECLWDMYRSIPSLEVPGASYLDEYYWLDKEDPNSSNCRLIYNRGDRLPSDGQYGLGKCANEIVKLIMTPEKEIEGQTIEEFFSDEFFKTNFWTYWSTMFAFEKWHSLAEMRRYAMRFIHHIDGLPDFTALKFNKYNQYESMVKPLLAYLKDHGVQFEYDCHVKNVEVDHEGDSKIAKKIVMTQNGKDKEIDLTHNDIVFVTNGSITESSTYGDQNTPAPITNAKGDSWKLWENLAKQDPAFGHPDVFCENLPERSWFVSATATLENKKLAPYFERLTKRSLYDGKVNTGGIITIVDSNWELSFTIHRQPHFKSQNPDQIVVWIYALYSDTEGNYIKKRIVDCTGKEIAEELLYHLGVPESQISELASEENMNTVPVYMPYITSYFMPRRDGDRPDVVPEGSINLAFIGNFAESPTRDTVFTTEYSVRTAMEAVYTLLNVDRGVPEVFDSIYDIRQLLRAMYYMSDKKKLADQDMPLPEKLAVKTGMRKIKKTWVEELLKEANLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -293948 for 5003 contacts (-58.8/contact) +
2D Compatibility (PS) -61450 + (NN) -29197 + (LL) 8
1D Compatibility (HY) -71600 + (ID) 19200
Total energy: -475387.0 ( -95.02 by residue)
QMean score : 0.557
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