Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFEEKTINRQTVFDGQIIKVAVDDVELPNGLGQSKRELVFHGGAVATLAVTPEHKIVLVKQYRKAIEGISYEIPAGKLE-TGESGSKEEAALRELEEETGYTG-NLEILYSFYTAIGFCNEKIVLYLATDLQKVENPRPQDDDEVLELLELSYEDCMQMVEKGMIQDAKTIIALQYYGLKMGGHS
1MK1 Chain:A ((6-183))----FETISSETLHTGAIFALRRDQVR------IVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVAGEP--PHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGR----------TMGWYPIAEAARRVLRGEIVNSIAIAGVLAVHAVTTGFA


General information:
TITO was launched using:
RESULT:

Template: 1MK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72505 for 1166 contacts (-62.2/contact) +
2D Compatibility (PS) -17487 + (NN) -1411 + (LL) 140
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -102663.0 ( -88.05 by residue)
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_1MK1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MK1-query.scw
PDB file : Tito_Scwrl_1MK1.pdb: