Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLAVLGTGMIVKEVLPVLQKIEGIDLVAILSTVRSLETAKDLAKEYNMSLATSEYKAVLDNEEIDTVYIGLPNHLHFDYAKEALLAGKHVICEKPFTLEASQLEELVSIANTRQLILLEAITNQYLPNFDLVKEHLSNLGDIKIVECNYSQYSSRYDAFKRGEIAPAFNPEMGGGALRDLNIYNLHLVIGLFGEPITAQY-LPNIERGIDTSGVLVLDYGHFKTVCIGAKDCSAEVKSTIQGDKGSIAILGPTNTMPKI-SLTMNGQESHVYQLNGDR--HRMHDEFVIFEGIISNLDFKRAAQALEHSRTVMKVLDMVTK |
4NHE Chain:A ((5-313)) | LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYS--RKLETAATFASRYQ-NIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLAD-KQVLGADFNYAKYSSKMPDLLAGQTPNVFSDRFAGGALMDLGIYPLYAAVRLFGKANDATYHAQQLDNSIDLNGDGILFYPDYQVHIKAGKNITSNLPCEIYTTDGTLTL----NTIEHIRSAIFTDHQGNQVQLPIQQAPHTMTEEVAAFAHMIQQPDLNLYQTWLYDAGSVHELLYTMRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NHE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204266 for 2554 contacts (-80.0/contact) +
2D Compatibility (PS) -32658 + (NN) -16810 + (LL) 544
1D Compatibility (HY) -19600 + (ID) 4700
Total energy: -277490.0 ( -108.65 by residue)
QMean score : 0.511
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