Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVVLVTGCASGIGYAQAQYFLKQGYQVYGVDKSDKPN------LNGNFNFIKLDLSSD------LSPLFTMVPTVDILCNTAGILDAYKPLLEVSDEELEHLFDINFFVTVRLTRHYLRRMVEKKSGIIINMCSIASFIAGGGGAAYTSSKHALAGFTRQLALDYAKDCIQIFGIAPGAVQTAMTASDFEPGGLAEWVASETPIGRWTKPSEVAELTGFLASGKARSMQGEIVKIDGGWSLK
3RSH Chain:A ((13-248))
--KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK---DEQRTATL--AQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYMI
General information:
TITO was launched using:
RESULT:
Template:
3RSH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155799 for 1870 contacts (-83.3/contact) +
2D Compatibility (PS) -23821 + (NN) -8196 + (LL) 768
1D Compatibility (HY) -12800 + (ID) 3650
Total energy: -203498.0 ( -108.82 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_3RSH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RSH-query.scw
PDB file :
Tito_Scwrl_3RSH.pdb
: