Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIVVGGGKVGTALCRSLVAEKHDVVLIEKKENVLKRVTKQHDIMGIVGNGANYKILEQAEVKNCDIFIAITDRDEVNMISAVLAKKM-GAKETVVRMRNPEY---SNPYFKDKNFLGFSSVVNPELLAAQYIANTIEFPNATSVEHFANGRVMLMEFKILEGNKLCHTSMSQIRKKFGNI--VICAIERDGKLIIPDGDATIQVKDKIF--VTGNRIEMILFHNYVKNKVVKNLMVIGAGRIAYYLLNILKNTNTHVKLVELNQEQAEYFSQEFPNVPVVHGDGTAKNILLEESVTSFDAVATLTGVDEENIITSMFLESIGIPKNITKVNRTSLLEIIDDKQLSSIITPKRIAVDHVMHFVRGRVNAQDSNLEAMHHIANDRIETLQFEIKETSKLANRSLASLKLKQNILIAAIIRNNKTIFPTGEDVLTVGDRIVVITLLKNITRTSDMLAR |
| 4G65 Chain:A ((5-431)) | -KIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIARIRSPQYLAQKEALFK-SGAIPVDHLIAPEELVTSYIERLIQYPGALQVVSFAEEKVSLVAVKAYYGGPLVGNALSALREHMPHIDTRVAAIFRQGRPIRPQGTTIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTYS-VKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAISPQQATISALLTHVR---RADIVNVSSLRRGAAEAIEAVAHGDESNSKVVGRAVGDIKLPPGTTIGAIVR--------GEEVLIAHDRTVIEQDDHVVMFLVDKKYV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4G65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -265521 for 3530 contacts (-75.2/contact) +
2D Compatibility (PS) -45449 + (NN) -6626 + (LL) 500
1D Compatibility (HY) -26000 + (ID) 6100
Total energy: -349196.0 ( -98.92 by residue)
QMean score : 0.521
|
|
|