Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRINKYIAHAGIASRRKAEELIKQGMVTINGQVVNELATKVKAGDLVEIEGSPIY-NEEKVYYLLNKPRGVISSVSDDKGRKTVIDLLPQ-VKERIYPVGRLDWDTTGLLILTNDGDFTDKMIHPRNEIDKVYLARIKGIATKENLRPLTRGVVIDGK--KTKPARYNIIKVDHEKNRSVVELTIHEGRNHQVKKMFEQVGLLVDKLSRTQFGTLDLT-GLRPGEARRLNKKEISQLHNAAINKS |
| 1VIO Chain:A ((3-233)) | LRLDKFIAENVGLTRSQATKAIRQSAVKINGEIVKSGSVQISQEDEIYFEDELLTWIEEGQYFMLNKPQGCVCSNDD---YPTIYQFFDYPLAGKLHSAGRLDVDTTGLVLLTDDGQWSHRITSPKHHCEKTYLVTLADPVEENYSAACAEGILLRGEKEPTKPAKLEILD------DYNVNLTISEGRYHQVKRMFAALGNKVVGLHRWKIGDVVLDESLEEGEYRPLTQSEIEKLV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91407 for 1701 contacts (-53.7/contact) +
2D Compatibility (PS) -23451 + (NN) -701 + (LL) 432
1D Compatibility (HY) -17200 + (ID) 3850
Total energy: -136177.0 ( -80.06 by residue)
QMean score : 0.558
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