Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVHLIVSGRVQGVGFRYATYSLALEIGDIYGRVWNNDDGTVEILAQSTDSNKMTQFIQKIRKGPSKWSKVTYVDIKLDNFDDFNDFKMRN
1W2I Chain:A ((3-90))
IVRAHLKIYGRVQGVGFRWSMQREARKLG-VNGWVRNLPDGSVEAVLEGDE-ERVEALIGWAHQGPP-LARVTRVEVKWEQPKGEKGFRIVG
General information:
TITO was launched using:
RESULT:
Template:
1W2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49770 for 674 contacts (-73.8/contact) +
2D Compatibility (PS) -9725 + (NN) -5836 + (LL) -40
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -70771.0 ( -105.00 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1W2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2I-query.scw
PDB file :
Tito_Scwrl_1W2I.pdb
: