Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASSLITKKKIAKSFKRLFISQAFDKISVSDIMEDAGIRRQTFYNHFVDKYALLEWIFQTELSEQVTDNLDYISGFQLLSELLTFFKMNQEFYIKLFQIEDQNDFSSYFESYCEQLVDKLLSDYSKS---NFSQKERVTFINYHSKALSYFIKYELI-NNSKEELFNRKVIEKIIRTSIENY
2IU5 Chain:A ((1-168))
MEKSIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFENDFAELINDNSDYYGWQNELLLLLRYLDENQIFYQKIFVID--KNFEHFFLIQWENLLDKVIFDQEKKSDYHWSDLEKSFICRYNAAAICAITRESIIRGNSLEKLYSQIVNLLLAQIKIFES
General information:
TITO was launched using:
RESULT:
Template:
2IU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70924 for 1139 contacts (-62.3/contact) +
2D Compatibility (PS) -17396 + (NN) -5016 + (LL) 44
1D Compatibility (HY) -16000 + (ID) 3400
Total energy: -112692.0 ( -98.94 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_2IU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IU5-query.scw
PDB file :
Tito_Scwrl_2IU5.pdb
: