Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQFLGEFLGTFILVLLGDGVVAGNVLSKTKEEGTGWTAIVFGWGIACTVAVYVSGLFSPAHLNPAVTLAMASIGAISWGQVIPFIIAQMLGAMVAATILWLHYYPHWKETKDSG----------LILASFSTGPAIR-HTPSNLLGEIIGTAILVITIMAIGPSKV---AAGLGPIIVGIVIFAVGFSLGPTTGYAINPARDLGPRLMHAILPIENKG---DSDWSYAWIPVVGPIIGGVLGAILYNIALTLI |
| 1LDF Chain:A ((8-256)) | KGQCIAEFLGTGLLIFFGVGCVAALKVAGA---SFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LDF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202600 for 2034 contacts (-99.6/contact) +
2D Compatibility (PS) -23042 + (NN) 3806 + (LL) 272
1D Compatibility (HY) -24000 + (ID) 3900
Total energy: -249464.0 ( -122.65 by residue)
QMean score : 0.244
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