Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKISEEEVRHVANLSKLRFSDQETKEFASSLSKIVDMIELLNEVDTEGVPVTTTMADRKTVMREDIAQPGNNRDDLFKNVPQHQDYYIKVPAILEDGGDA
2F2A Chain:C ((3-94))
-KVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTI-------
General information:
TITO was launched using:
RESULT:
Template:
2F2A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8069 for 387 contacts (-20.9/contact) +
2D Compatibility (PS) -9811 + (NN) -4319 + (LL) 136
1D Compatibility (HY) -3600 + (ID) 1850
Total energy: -27513.0 ( -71.09 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_2F2A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F2A-query.scw
PDB file :
Tito_Scwrl_2F2A.pdb
: