Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGHGIDLQEIEAITKAYER-NQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYSKALGTGIGK-VNFHDIEILSDDKGAPLITKEPF---------NGKSFVSISHSGNYAQASVILEEEK
3QMN Chain:A ((4-127))
MIVGLGTDIAEIERVEKALARSGENFARRILTDSELEQFHAS---KQQGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTISHDKLGKPLLILSGQAAELASQLQVENIHLSISDERHYAMATVILER--
General information:
TITO was launched using:
RESULT:
Template:
3QMN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33378 for 832 contacts (-40.1/contact) +
2D Compatibility (PS) -12558 + (NN) -6817 + (LL) -40
1D Compatibility (HY) -8000 + (ID) 2850
Total energy: -63643.0 ( -76.49 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3QMN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QMN-query.scw
PDB file :
Tito_Scwrl_3QMN.pdb
: