Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLPTEIRYRPYDEWTEEDKENIVKNVSKSPWRATYHLEAKTGLLNDPNGFSYFNGKFHLFYQNWPFGAAHGLKQWVHTESDDLVHFKETGIKLKPDHVNDSHGAYSGSALAI-DDKLFLFYTGNVRDMK----WNRDPRQIGAWMTSD-GK-ITKFDKVLISQP-NDVTEHFRDPQIFNYDNQFYAVIGAQNSKKCGFIKLYKALNNDIHHWEFVGDLDFGGTGSEYMIECPNIIFVK-----GKPVLLYSPQGLDKNELDYQNIYPNTYKIGQYF--DANSSKIVEPSPIYNLDYGFEAYATQGFNTSDGRAFIVSWIGLPDIDYPSDQFDYQGAMSLVKELSIKN-GNLYQYPVPAMKNLRQHQAEFK-------T--QLQ-TNNTYELELLVPRN--DLSSFVLFA-NPK-GQGLSITIDTAKGKVIVDRSQAGQQYATEFGTSRQCNI-----PKDATSVNVFIDKSIFEIFINKGEKVFTGRVFPDAEQSGIQLKE--GH--V-HGKYFELKY |
| 3PIJ Chain:A ((34-513)) | --------------------------KRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDELTSATKQG-MIIDCPTDKVDHHYRDPKVWKTGDTWYMTFGVSSADKRGQMWLFSS--KDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRNVSNAGYMIGTWEPGGEFKP---E-TEFRLWDCGHNYYAPQSFNV-DGRQIVYGWMSPFVQPIPMEDDGWCGQLTLPREITLGDDGDVVTAPVAEMEGLREDTLDHGSVTLDMDGEQIIADDAEAVEIEMTIDLAASTAERAGLKIHATEDGAYTYVAYDGQIGRVVVDRQAMANGD-R---GYRAAPLTDAELASGKLDLRVFVDRGSVEVYVNGGHQVLSSYSYASEGPRAIKLVAESGSLKVDSLKLHHMKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118946 for 3813 contacts (-31.2/contact) +
2D Compatibility (PS) -47768 + (NN) -12846 + (LL) 2264
1D Compatibility (HY) -24800 + (ID) 5650
Total energy: -207746.0 ( -54.48 by residue)
QMean score : 0.399
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