Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIILIIALATILTFVTWMLIRPKALRYILGLLSLALLFASVWMLTDHFVNHTGMTIETKTKTREIYSAGDSNAPFGLMIYKEIGTHSSNNVLVYRT-DLNQKEAKAHFVPNTKEVTSAVKK---SA-SYQLADVKKATVTTKTKRY-VWK-----DSLSKLLYGFAGEN-GELISQKSVAKIPRKTWL-VLTKEQSEHLESAAAKLKEQMTLQAKVNPVKAMEIKTLAKTNPEAYAEMQVKALK--------EALNIKE---------- |
| 4RGP Chain:A ((2-256)) | -------NATEQETLTILLDVYAYYQAYQIVKASQFFSDDIIFLLELLKERRELNVDFLFQNQVHLQELELTYHISLL-----DNAYEEELLANYIMDLEAKLRNDHIIDFVRSVSPILYRLLMRLMQSQVADINDYIYDAKNDQYDTWKFDKMHDSANPFVQNFVAKGRDSKITSRSLADFIQLTDLPQAIKDNILLLRDFEKSVRNPLAHLIK--PFDEEELHRTTGFSSQTFLEKIIQLAVFSGIHYDNDKFYFDKVNELIKRIYQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19138 for 1500 contacts (-12.8/contact) +
2D Compatibility (PS) -22964 + (NN) -3024 + (LL) 2124
1D Compatibility (HY) -8400 + (ID) 1650
Total energy: -53052.0 ( -35.37 by residue)
QMean score : 0.313
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