Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLFHSLTFKHPVLRVNNRDLNIAFYQESLGFKLISEENAIAVFSAWQNKEASFIIEESPTYRTRAVNGTKKLAKIIVKSQDAKDIEKLLANGAQTTQVYQGQNGYAYETVSPEGDLFLLHAEDDLSQLVAI-ERPELEKNDDTTGLSNFVFQSISLNVPDAVKAEAFYDKVFAGKFPINLSFKEAQGQDLQIAPNETWDIEILECCVNEDTNLNDLKSTFESLGLDVYLDSKEKILVISDTSNIEIWISKE
3E0R Chain:A ((14-240))
-----------PTLKANNRKLNETFYIETLGMKALLEESAFLSLGD-QTGLEKLVLEEAPSMRTRKVEGRKKLARLIVKVENPLEIEGILSKTDSIHRLYKGQNGYAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SMELHLPTDI--ESFLESSEIGA---SLDFIPAQGQDLTVDNTVTWDLSMLKFLVNE-LDIASLRQKFES--TEYFIPKSEKFFLGKDRNNVELWFEEV
General information:
TITO was launched using:
RESULT:
Template:
3E0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65857 for 1695 contacts (-38.9/contact) +
2D Compatibility (PS) -24463 + (NN) -10873 + (LL) 1660
1D Compatibility (HY) -22800 + (ID) 4650
Total energy: -126983.0 ( -74.92 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_3E0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E0R-query.scw
PDB file :
Tito_Scwrl_3E0R.pdb
: