Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQKYERILIAIDGSYESELAVEKGINVALRNDAELLLTHVID-AHAYQSEGVFSDYVFDRQEQESADVLAYFEKLAHSKGLTKIKKITEIGNPKTLLAKDI--PIRE-KADLIMVGATGLNTFERLLIGSTSEYILRHSKVDMLVVRDSKKTL
4WNY Chain:A ((6-149))
----YSIILVALDGSQTASHALDAALELAADAHARLVPVYVVDM---FDTPGYDPSILVDAFREEGRRVLDDAQARMTRRGVAGAPRLVEVE---EDVAERLERAAREIGASLIVMGTH-----------SVAERLLRHARCPVLMIPA-----
General information:
TITO was launched using:
RESULT:
Template:
4WNY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80855 for 881 contacts (-91.8/contact) +
2D Compatibility (PS) -13562 + (NN) -4098 + (LL) 1440
1D Compatibility (HY) -9200 + (ID) 1650
Total energy: -107925.0 ( -122.50 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_4WNY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WNY-query.scw
PDB file :
Tito_Scwrl_4WNY.pdb
: