Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIALFAGGDLTYFEYDFDYFVGIDRGSLFLLKNGLSLDMAVGDFDSITEDELLYIKHYCSNIVSASAEKNDTDTELALKTIFKEFPEAQVTVFGAFGGRIDHMMSNIFLPSDTDLEPFMSQIRLKDEQNIVTYLPSGKNQVSRIEGMSYVSFMPESESTLQISGAKYELNKSNYFKKKMYSSNEFMTSPIEVELKDGYLIIIYSKDRG
3IHK Chain:A ((2-208))
-TKVALFSGGDLTYFTRDFDYFVGIDKGSSFLLKNQLPLDLAIGDFDSVSAEEFKQIKAKAKKLVMAPAEKNDTDTELALKTIFDCFGRVEIIVFGAFGGRIDHMLSNIFLPSDPDLAPFMRCFKLRDEQNLVEFFPAGQHQIEQATDMVYISFMAANGAHLSIQDAKYELTEENYFQKKIYSSNEFKDKPICFSVASGYVVVIQTKD--
General information:
TITO was launched using:
RESULT:
Template:
3IHK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137874 for 1651 contacts (-83.5/contact) +
2D Compatibility (PS) -22624 + (NN) -12998 + (LL) 136
1D Compatibility (HY) -24800 + (ID) 6150
Total energy: -204310.0 ( -123.75 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3IHK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IHK-query.scw
PDB file :
Tito_Scwrl_3IHK.pdb
: