Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALIDIIEKQLADTQRKISDLDDAYHHSCCQFEEKLDDLSVRKNKITNMLQETYDAVEYDLRYSNDSSDMMTLNRILDSYHDDLEQAYHKEYYALSAQEEEYR---ANYIRQRSEHELTFEELQREKKRELMK------
2CBL Chain:A ((1-131))
-PPGTVDKKMVEKCWKLMDKVVRLCQ------NPKLA-LKNSPPYILDLLPDTYQHLRTILSRYEGKMETLGENEYFRVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHMLAELKGIFPSGLFQGD
General information:
TITO was launched using:
RESULT:
Template:
2CBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3717 for 818 contacts (4.5/contact) +
2D Compatibility (PS) -13085 + (NN) -2994 + (LL) 512
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -17500.0 ( -21.39 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_2CBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CBL-query.scw
PDB file :
Tito_Scwrl_2CBL.pdb
: