Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSRKKDKLVLRLTTTLLVFGLGGVWFYNYKNDNVEPTVTSASDQTTTFIQTISPTAIEISKTYDLYASVLLAQAILESSSGQSDLSKAPNYNLFGIKGEYKGKSVQMPTLE-DDGKGNMTQIQAPFRAYPNYSASLYDYAELVS------SQKYASVWKSNTSSYKDATAALTGLYATDTAYASKLNQIIETYSLDAYDK
3FI7 Chain:A ((32-183))
-----------------------------------------------TFINSISTQAMDLCKKYNLYPSVMIAQAALESNWGRSELGKAPNYNLFGIKGSYNGKSVTMKTWEYSDSKG-WYQINANFAKYPSHKESLEDNAKKLRNGPSWDSSYYKGAWRENAKTYKDATAWLQGRYATDNTYASKLNTLISSYNLTQYD-
General information:
TITO was launched using:
RESULT:
Template:
3FI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78429 for 1114 contacts (-70.4/contact) +
2D Compatibility (PS) -15492 + (NN) -1161 + (LL) 2856
1D Compatibility (HY) -12800 + (ID) 4050
Total energy: -109076.0 ( -97.91 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_3FI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FI7-query.scw
PDB file :
Tito_Scwrl_3FI7.pdb
: