Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVATLIIIRGNSASGKSKIAKQLQAELGENTLLLSQDYLRREMLGTKDGE-----N---TTTIPLLINLLNYGYHNCSYIILEGILRSDWYTPVWKHILKHNPNNTYAYYYDLSFQETVKRHSTRLKSLE-FGEDSLARWWLEKDF---LKEIPEKILTKAMSLEDVKKLIMTDVLP
2RHM Chain:A ((3-183))
QTPALIIVTGHPATGKTTLSQALATGL--RLPLLSKDAFKEVMFDGLGWSDREWSRRVGATAIMMLYHTAATILQSGQSLIMESNFRVDLDTERMQNLHTIAPFTPIQIRCVASGDVLVERILSRIAQGAR-SPADLELVRSRGDIPPLPLGGPLLTVDTTFPEQIDMNAIVQWVRQ
General information:
TITO was launched using:
RESULT:
Template:
2RHM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69137 for 1149 contacts (-60.2/contact) +
2D Compatibility (PS) -16761 + (NN) -3112 + (LL) 64
1D Compatibility (HY) -4400 + (ID) 1600
Total energy: -94946.0 ( -82.63 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_2RHM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RHM-query.scw
PDB file :
Tito_Scwrl_2RHM.pdb
: