Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKFKLFFKSTEKEEEWIDKVQKSGYAFTGINSFLPAFYYFKRDKEKDKMSIKMDFKK-------YMSKDDYANYITLFEDSGWKHISGSRWGGLHYFQKIKPEASSEIFSDQESKSAMAMSYYKYTCEHAFFSLFYFFLLIRTTSITIFDPKSWYLTQGLWEMQGKIFWLAFLFETPFALLRILPMFYFLISGIYYITRAVKPKEIIN |
1F3R Chain:B ((43-103)) | ------------KGPEWMGRMWYDGY--TAYNSALKSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5152 for 233 contacts (-22.1/contact) +
2D Compatibility (PS) -5290 + (NN) 1530 + (LL) 1580
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -12632.0 ( -54.21 by residue)
QMean score : 0.141
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