Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTNVMANYSYGEDCFKEIPSVLATYRIQSIAFVGGKRALDSSEAEVRSILEEANIKVTGSFVYGTDSTQSNIDKLVANPQVQAAD---AILGFGGGKALDTAKMVAKELGKNSFTIPTICSNCSAGTAIAVVYNDDHSFLRYG-YPESPLHIFINTRIIAQAPSKYFWAGIGDGISKAPEVERATLEAKTNKLPHTA-VLGQAVALSSKEAFYQFGEQGLKDVEANLASRAVEEI--ALDILISTGYASNLVNQPDFYYNSCHAHAFYYGTTAIQRQ-GEFLHGVVVAFGVL---VLHAYFNELEELEKVARFNKSLGLPTTLADV---SLSEKDIPKIVEIAMTTNEY---KNTPFDPKMFAQAILAADAFGQTLA |
| 1TA9 Chain:A ((72-422)) | --------YVQGRHAFTRSYMYVKKWATKSAVVLADQNVWNICANKIVDSLSQNGMTVT-KLVFGGEASLVELDKL----RKQCPDDTQVIIGVGGGKTMDSAKYIAHSMNLPSIICPTTASSDAATSSLSVIY----QFQKYSFYPLNPNLIFIDTDVIVRAPVRFLISGIGDALSTWVETESVIRSNSTSFAGGVASIAGRYIARACKDTLEKYALSAILSNTRGVCTEAFENVVEANTLMSGLGFENGGL---------AAAHAIHNGMTAIHGPVHRLMHGEKVAYGTLVQVVLEDW--PLEDFNNLASFMAKCHLPITLEELGIPNVTDEELLMVGRATLRPDESIHNMSKKFNPSQIADAIKAVDSYSQKWQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TA9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199262 for 2896 contacts (-68.8/contact) +
2D Compatibility (PS) -35611 + (NN) -11075 + (LL) 536
1D Compatibility (HY) -19200 + (ID) 4550
Total energy: -269162.0 ( -92.94 by residue)
QMean score : 0.446
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