Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKSLISNLILINSITLFLGFYLIYFSVNYVIKDYVHQMTRNSMQANFTILDSIYNNKKIPDENMVNQDSIFVWSYYAIFDQHYRMKYGTDNHKKESHDIIRYLTQKRLWQISKEKDGMFVTIKKKTYYVMTKDYSGILVDGSIKKVPKAQSQLFHVINFSDITYTQHLITKINHFLIVILVLTYIPMLFIMRKTFTGIRESIQSVQTYISSLWKNQGNHQSSQKEIVFSDFDPLLLESQEMANRIYQAEESQRNFFQNASHELRTPLMSIQGYTEGVQEGII-DAELAHS---VILQESKKMKQLVDDIILLSKLDSNLSDQKDEF-SLNELLNSIIAYFKPLANKQKISITYRPDKHE-----KLLKGNEELIQRAINNILSNALRYA-----VSHIEISYTNQK-LTISNDGPAISKEDLPYIFDRFY----KGHGGQTGIGLAMTKEIIKQHHGNIIAES-DSTSTTFTIYFNCHKIA |
4U7O Chain:A ((32-258)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNDRKQFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMFNYVLDRFDMILKKDDNPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFRVDK--QGG-TGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51333 for 1316 contacts (-39.0/contact) +
2D Compatibility (PS) -21272 + (NN) -6191 + (LL) 20548
1D Compatibility (HY) -16000 + (ID) 3300
Total energy: -77548.0 ( -58.93 by residue)
QMean score : 0.414
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