Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKILIPTAKEMKVCQNIARPKLSAQTKIIIDYFSTLTVSDLEDIYRINTSAARCEAQRWQDFKSKQLTLNPAIKLFNGLMYRNIKRHNLSTSEAQFMENSVFITSALYGIIPAMTLISPHRLDFNTKIKINNNSLKVFWRENYDTFMQSDDIMVSLLSNEFETVFSPKERQKLIHLNFIEDRDGQLKTHSTISKKARGKCLTAMMENNCQTLEHLKQLRFDGFCYDNELSDSKQLTFVKKQT |
| 1NEX Chain:B ((398-457)) | -------------------------------------------------------------------------------------------------------------------------------------------------TFYVSDNILVSGSENQFN-IYNLRS-GKLVHANILKDAD------QIWSVNFKGKTLVAAVEKDGQSFLEILDFS----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18270 for 358 contacts (-51.0/contact) +
2D Compatibility (PS) -6324 + (NN) -1506 + (LL) 13300
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -17900.0 ( -50.00 by residue)
QMean score : 0.011
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