Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRCSWVNLDNPLYVAYHDKEWGRAVHDDHVLFELLCLETYQSGLSWETVLNKRQEFRQVFHHYNIEKVAAMSDADLEIILQNPRVIRHRLKLFSTRQNARSIILIQKEFGSFDRYIWSFVDNKVQVNSVNNYNDVPASTTLSERLSKDLKKRGFKFVGPTCLYSFIQAAGMVNDHENICDFK
2OFK Chain:A ((2-182))
-QRCDWVSQ-DPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIRHRGKIQAIISNARAWLAMEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPASDALAKALKKRGFKFVGTTICYSFMQACGLVNDHITGCFCH
General information:
TITO was launched using:
RESULT:
Template:
2OFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97461 for 1417 contacts (-68.8/contact) +
2D Compatibility (PS) -19208 + (NN) -6545 + (LL) 132
1D Compatibility (HY) -16800 + (ID) 4300
Total energy: -144182.0 ( -101.75 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_2OFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OFK-query.scw
PDB file :
Tito_Scwrl_2OFK.pdb
: