Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSNKVQERRERKIKEAIKAKNWDEVTRLLQQEQSNAERRDRYHNRRIKDETIASKNAKKSVRY------DVIASSDLNPEEAL--ILEELRQAI---REAKASLSEIDSKIVEMIAEQ-GSSYKETARYITEHYKKM---SDVTVKSHY--CKALKKLAPLLKAYR--------------------------- |
| 4ATG Chain:A ((1-195)) | GSHMLPKELQLYFDKILSMIKSDMKDIAIECLEKE-SGLQQLVPYFIQHISELILKSFKEAEVLKTCIALYFSLIKNKHVFIDPYLHQILPSLLTCVIGKSIVDDDVRKMSADIVKYIYDTYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGALYCLSILSKNVVNTVIREHAEEYKRTIGKKKVTNLLDNVLNV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ATG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4521 for 981 contacts (4.6/contact) +
2D Compatibility (PS) -16004 + (NN) -7749 + (LL) 120
1D Compatibility (HY) -9200 + (ID) 1500
Total energy: -29812.0 ( -30.39 by residue)
QMean score : 0.459
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