Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNDTRREKTKRAIEAAMITLLKDQSFDEISTINLTKTAGISRSSFYTHYKDKYEMIDQYQQSLFNKVEYIFD-RNQFKK-EDALLEIFQFLD-RESLFAALLTQNG--TKEIQTYILNKLQLMLSKELPVVNPDATKSDINRLYYSVYLSHAIFGVYQMWITRGKKESPQQITQVLLSLLPQT
2IU5 Chain:A ((1-171))
---MEKSIITQKIIAKAFKDLMQSNAYHQISVSDIMQTAKIRRQTFYNYFQNQEELLSWIFENDFAELINDNSDYY---GWQNELLLLLRYLDENQIFYQKIFVIDKNFEHFFLIQWENLLDKVIF--DQEKKSDYHWSDLEKSFICRYNAAAICAITRESIIRGN--SLEKLYSQIVNLLLAQ
General information:
TITO was launched using:
RESULT:
Template:
2IU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75857 for 1127 contacts (-67.3/contact) +
2D Compatibility (PS) -17870 + (NN) -11262 + (LL) 972
1D Compatibility (HY) -9600 + (ID) 1600
Total energy: -115217.0 ( -102.23 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_2IU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IU5-query.scw
PDB file :
Tito_Scwrl_2IU5.pdb
: