Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLDD-DYHFSAVAITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLLLQVPTER--GHLPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
2OZ6 Chain:A ((3-205))
--------------------LKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFE--QERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGT--------
General information:
TITO was launched using:
RESULT:
Template:
2OZ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117429 for 1428 contacts (-82.2/contact) +
2D Compatibility (PS) -21302 + (NN) -6066 + (LL) 2388
1D Compatibility (HY) -12000 + (ID) 2550
Total energy: -156959.0 ( -109.92 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_2OZ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OZ6-query.scw
PDB file :
Tito_Scwrl_2OZ6.pdb
: