Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRVNCMSDRL-FELLDGSCLNEKQHEAFVLQTVSEDGWPHAAMISAGEIIALSRTDIRIALWKNTMTSANILRTGKAQFTAWWKGAAYYVKLE-CAPLPPLKDAEYERDRFSCRIVSVKEDVAKYADLTSGVRIQLHSPEEVL-SRWKKTLEDLKR
2Q9K Chain:A ((5-151))-KVEHRLSEQQMKALTDLP-------LVFLITHDQSKSWPITHAISW--VYAKDETTIRFAIEADSLLVKTLADHPVFTLIFFADQSTYSLTCTDVAAWETTARLPLKVALYEGQIKEVRDILFYGAAVSDRPRVYKTYDEAAAMQLDQQIQDILKG


General information:
TITO was launched using:
RESULT:

Template: 2Q9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 625 -93784 -150.05 -651.27
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -150.05
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_2Q9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Q9K-query.scw
PDB file : Tito_Scwrl_2Q9K.pdb: