Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQQKKTAGKKAGSWSLLMGAAFLMATSAIGPGFLTQTATFTNTLAASFGFVILISIILDIFAQTNVWRIIAVSGK-RGQEIANMVLPGLGYFIAILVVLGGLAFNIGNIGGAGLGLQVLFGITPETGALISAVIAILIFVIKEAG-KAMDRFTQIAGFVMIILTVYVAATTAPPV-----GQAVANTFVPEHISIFAIVTLVGGTVGGYITFAGGHRLLDAGIKG------KESIPQVTKSSVVGILITSVMRIALFLAVLGVVSKG--------LHIDESNPAASVFKLAAGNVGYKIFGLIMWSAAITSVIGAAYTSVSFFKTFS-PKIEKNSRGIIIGFIVVSTLAFVTI---GQPAKI---LVLVGSLNGLILPIALGTLLVAAYKKNIVGDYKHPLWLTSTGALVVIVMAVMGIYTLCTQLPQLWS
4WGV Chain:A ((45-439))------VGYMDPGNWITSMQGGA--------------------QYGYTLLFVILISSLAAMLLQSMTVRLGIATGKDLAQMTRHFLSKPVAIIFWIIAELAIIATDIAEVIGSAIALDLIFGIPLIVGALITVFDVFLLLFIMRFGFRKIEAIVGTLIFTVLAIFVFEVFISSPQLTDILNGFVPHKEIVTNQGILYIALGIIGATIMPHNLYLHSSIVQSRKYDRHDNEEKAQAIKYATIDSNLQLSIAFVVNCLLLTLGAALFFGTKTNDLGGFYDLYHALKTEPVLGATLGGVMSTLFAVALLASGQNSTITGTLAGQIVMEGFLRLSIPNWLRRLITRSLAVIPVIICLIIFKGNSEKIEQLLVFSQVFLSIALPFSLIPLQLATSNKKLMGPFINKTWVNIISWTLIVILSGLNVY-----------


General information:
TITO was launched using:
RESULT:

Template: 4WGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1764 -272279 -154.35 -741.90
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -154.35
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.329

(partial model without unconserved sides chains):
PDB file : Tito_4WGV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WGV-query.scw
PDB file : Tito_Scwrl_4WGV.pdb: