Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------MPWSMKDYPASLKNLEKPVRKKAIDIANAMIDEG--YEEGRAIPIATSKAKEWAENASTDEIDDFLTHDDETERDADPSSGSGPELMNKAEHVIKH--KKGWAVKAEGAKRVSEIKDTKKEAIERAKEIAAHKGTEVIVHLADGSVQRKIKTGS
4J1V Chain:A ((9-180))LRQAVMLPEGEDLNEWIAVNTVDFFNQINMLYGTITEFCTEASCPVMSAGPRYEYHWADPIKCS-APKYIDYLMTWVQDQL---DDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLG


General information:
TITO was launched using:
RESULT:

Template: 4J1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 521 -34746 -66.69 -237.98
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -66.69
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_4J1V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J1V-query.scw
PDB file : Tito_Scwrl_4J1V.pdb: