Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDQSCVRIMTEWDIVAARQLGRNVAKELGFGTVDQ-ARITTAISELARNIYLYA----GKGQIGIEQVADRGKKGLKIIAEDQGPGIPDIRKVMEDGFSTSGGL---GAGLPGVKRLMDEFSLNSVAGEGTEIQAIKWLR
1TIL Chain:A ((33-138))--------------------------------TMDELTEIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTV--RDEGVGIPDIEEARQPLFTTKPELERSGMGFTIMENFMDEVIVESEVNKGTTVYLKKHI-


General information:
TITO was launched using:
RESULT:

Template: 1TIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 393 -27833 -70.82 -284.01
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -70.82
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_1TIL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TIL-query.scw
PDB file : Tito_Scwrl_1TIL.pdb: