Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTNYWIGVVSEQHVLKGAAGGFAQLCHGKKAPLAKMKEGDWLIYYSPRDAYPDGKLLR-SFTAIGKVKSGNIYPYQM--------APNFIPYRLDIDYYPCHKIGFYDIKSKLEFVQETKHLGFLF-RRGHFEISKKDFLTIAQAMGVNISGMAL
2HD9 Chain:A ((1-145))--MTYWICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTS-EPYVDFSRIFKPHRGGKETYPYRVKIKPIKIGEINFKPLINDLKFIKNKKRWSMHFFGKAMRELPEEDYKLIEKLLL--------


General information:
TITO was launched using:
RESULT:

Template: 2HD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 587 -85859 -146.27 -635.99
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -146.27
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_2HD9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HD9-query.scw
PDB file : Tito_Scwrl_2HD9.pdb: