Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIRNPFKDKYYSHDRRALNMLALRVPGLAFILMIYIASIVLQFVSGGWSILLLYAFTILIAIFALLHWHSYRWVKKRVILYFAVQGLITFALANLMTGFFILVIIGLYAFLIGQIIGMADRRRTFLILYLLLLLVINSAYHLHKGEVLHFIVIAAPIMIVIITYAATFFAQVDEKIKAQLTLERLELAHQQVEQLTLQNERQRMARDLHDTLAQGLVSLNMQLDAIHVHLAKGNTERAKEIIQQSMKRVKSTIADARSAIDDLRS-KSEEIGV-LKERITSLMDHFIESTGMACLL-DYRLHQVLDVRTAENCYYIIGECMTNAAKHAEAKTIWISI---WDDEKGRLHLTVKDNGKGFDVEKGKKKRGHYGLLGIQERVRAINGQFNIKSTKLKGTQIEITVPIQGEMQDE
3EHJ Chain:A ((15-214))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANERIAELVKLEERQRMARDLVDTLGQKLSLMGLKSDLARKLIYKDPEQAAREL--------KSVQQTARTSLNEVRKIVSSMKGIRLKDELINIK-QILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKE----VVITVSDDGT-FKGEENSF---H-GLLGMRERLEFANGSLHIDTE--NGTKLTMAIP--------


General information:
TITO was launched using:
RESULT:

Template: 3EHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 708 -68692 -97.02 -359.64
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -97.02
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_3EHJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EHJ-query.scw
PDB file : Tito_Scwrl_3EHJ.pdb: